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Table of Contents

  • Installation
    • Docker
    • Installing MongoDB
    • Installing CytoPy
  • Introduction to the framework and managing data
    • Connecting to the database
    • Setting up a Project
    • Adding Subjects and meta data
    • Adding an Experiment
    • Adding cytometry data
    • Accessing data
    • Deleting data
    • Examples
  • Tutorials
    • General note on utilities
  • API Reference
    • cytopy.data.errors
    • cytopy.data.experiment
    • cytopy.data.fcs
    • cytopy.data.gate
    • cytopy.data.gating_strategy
    • cytopy.data.geometry
    • cytopy.data.mapping
    • cytopy.data.population
    • cytopy.data.project
    • cytopy.data.read_write
    • cytopy.data.setup
    • cytopy.data.subject
    • cytopy.flow.cell_classifier.cell_classifier
    • cytopy.flow.cell_classifier.keras_classifier
    • cytopy.flow.cell_classifier.sklearn_classifier
    • cytopy.flow.cell_classifier.utils
    • cytopy.flow.clustering.consensus
    • cytopy.flow.clustering.flowsom
    • cytopy.flow.clustering.main
    • cytopy.flow.plotting.asinh_transform
    • cytopy.flow.plotting.embeddings_graphs
    • cytopy.flow.plotting.flow_plot
    • cytopy.flow.plotting.hlog_transform
    • cytopy.flow.plotting.logicle_transform
    • cytopy.flow.build_models
    • cytopy.flow.dim_reduction
    • cytopy.flow.fda_norm
    • cytopy.flow.feature_selection
    • cytopy.flow.gate_search
    • cytopy.flow.neighbours
    • cytopy.flow.ref
    • cytopy.flow.sampling
    • cytopy.flow.transform
    • cytopy.flow.tree
    • cytopy.flow.variance
  • License
cytopy
  • Docs »
  • API Reference »
  • cytopy.flow.gate_search
  • Edit on GitHub

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