cytopy.flow.tree¶

cytopy tracks the population “tree” of a FileGroup when a FileGroup is loaded into memory and is being analysed. This module handles the creation and modification of this “tree” using the anytree library.

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Functions:

construct_tree(populations)

Given a list of populations, construct a tree of population hierarchy using the population parent information.

cytopy.flow.tree.construct_tree(populations: List[cytopy.data.population.Population]) → Dict[str, anytree.node.node.Node]¶

Given a list of populations, construct a tree of population hierarchy using the population parent information.

Parameters: populations (List[Population]) – List of Population objects
Returns: Dictionary of Node objects
Return type: dict
Raises: AssertionError – Root population is missing